Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
---|---|---|---|
heatmap-prepare.cwl
Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order. |
https://github.com/datirium/workflows.git
Path: subworkflows/heatmap-prepare.cwl Branch/Commit ID: 62323c137c0ce9b3f843df0dfbda28dafa7c90cf |
||
mut3.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut3.cwl Branch/Commit ID: 10492acee927c177933160f6ad67085f9112b0d1 |
||
ValidateArrayElementCoordinates
Plot and compare array element coordinates. |
https://gitlab.desy.de/gernot.maier/cwlsandbox.git
Path: workflows/ValidateArrayElementCoordinates.cwl Branch/Commit ID: cbfd74d867b39b5ff80869d7dd05eb2ccd8c9398 |
||
gcaccess_from_list
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: e9cc6de8cd1e00345969c646e5e6f27d7d10420f |
||
SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination
Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs. |
https://github.com/datirium/workflows.git
Path: tools/soupx-subworkflow.cwl Branch/Commit ID: 22880e0f41d0420a17d643e8a6e8ee18165bbfbf |
||
taxonomy_check_16S
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919 |
||
allele-process-reference.cwl
|
https://github.com/datirium/workflows.git
Path: subworkflows/allele-process-reference.cwl Branch/Commit ID: 62323c137c0ce9b3f843df0dfbda28dafa7c90cf |
||
kmer_seq_entry_extract_wnode
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 9abcceb95c8dcb74b98d7eeda265d8f3a9a4329e |
||
extract_gencoll_ids
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 686b570a9fa46f3ace3f8e9935490b75df86a1fc |
||
kmer_seq_entry_extract_wnode
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919 |