Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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running cellranger mkfastq and count
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd |
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running cellranger mkfastq and count
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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kmer_build_tree
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 6ac47e5703d8c8cdac698de91143829b3911e9b2 |
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exome alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 9161ef43f7bf0e22b365fde9ec92edcb8601798e |
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default-dir5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-dir5.cwl Branch/Commit ID: 75271e2a0887d47cca4077b60dd51ac763c09b63 |
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Downsample and HaplotypeCaller
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/downsample_and_recall.cwl Branch/Commit ID: 700e73aaed6db1ad538dd27b2e1709f436ad3edb |
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bam to trimmed fastqs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4 |
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download_root.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/unix/download_root.cwl Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1 |
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integrity.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/integrity.cwl Branch/Commit ID: 1046947f8d2923e6563b3aceac9e435554c5bea1 |
