Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph schemadef_types_with_import-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/schemadef_types_with_import-wf.cwl

Branch/Commit ID: eb3f25a9e9414a7dba394f7627e02e63d7f1418c
workflow graph WGS and MT analysis for fastq files

rna / protein - qc, preprocess, filter, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/wgs-fasta.workflow.cwl

Branch/Commit ID: 8698ae242c1f7addf0003663192bb43d7cd36d09
workflow graph SetPhotonDelay

Derive additional delay of photon arrival times at the photodetectors.

 https://github.com/gammasim/workflows.git

Path: workflows/SetPhotonDelay.cwl

Branch/Commit ID: e0525b01ebee3ac1b4f0128a0002c6543a5918cf
workflow graph ValidateParameterByDataComparision

Validation by comparing simulation parameter with calibration or laboratory data values. Might include statistical evaluation of differences, plotting, or expert review.

 https://github.com/gammasim/workflows.git

Path: workflows/ValidateParameterByDataComparision.cwl

Branch/Commit ID: e0525b01ebee3ac1b4f0128a0002c6543a5918cf
workflow graph count-lines9-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines9-wf-noET.cwl

Branch/Commit ID: eb3f25a9e9414a7dba394f7627e02e63d7f1418c
workflow graph step_valuefrom5_wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step_valuefrom5_wf_v1_2.cwl

Branch/Commit ID: f14ff6a51d14430b4d02ee1d352a19644d231113
workflow graph directory.cwl

Inspect provided directory and return filenames. Generate a new directory and return it (including content).

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/directory.cwl

Branch/Commit ID: 250e6849c8c1dc3ae15f11ae1355ef3486f87263
workflow graph retrieve sequence and perform pairwise alignment (sub-workflow process)

\"Perform pairwise alignment of protein sequences for pairs identified by structural similarity search. Step 1: retrieve sequence from blastdbcmd result Step 2: blastdbcmd: ../Tools/15_blastdbcmd_v2.cwl Step 3: seqretsplit: ../Tools/16_seqretsplit.cwl Step 4: needle (Global alignment): ../Tools/17_needle_v2.cwl Step 5: water (Local alignment): ../Tools/17_water_v2.cwl \"

https://github.com/yonesora56/plant2human.git

Path: Workflow/11_retrieve_sequence_wf_v2.cwl

Branch/Commit ID: a01b5a933995e7528a3ef7b07ea2b8a3cbd905bd
workflow graph phaseup-concat.cwl

https://git.astron.nl/RD/VLBI-cwl.git

Path: workflows/phaseup-concat.cwl

Branch/Commit ID: e31c2e97efa10efd023c65a68f4209e674731a0d
workflow graph taxcheck.cwl

Perform taxonomic identification tasks on an input genome

https://github.com/ncbi/pgap.git

Path: taxcheck.cwl

Branch/Commit ID: 16952d6db8571ca56cbf7bd63e11c939945bc145