Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph import_schema-def.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/import_schema-def.cwl

Branch/Commit ID: 0e37d46e793e72b7c16b5ec03e22cb3ce1f55ba3

workflow graph tt_kmer_compare_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_compare_wnode.cwl

Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982

workflow graph Cell Ranger ARC Aggregate

Cell Ranger ARC Aggregate =========================

https://github.com/datirium/workflows.git

Path: workflows/cellranger-arc-aggr.cwl

Branch/Commit ID: 60854b5d299df91e135e05d02f4be61f6a310fbc

workflow graph scatter2.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatter2.cwl

Branch/Commit ID: 75271e2a0887d47cca4077b60dd51ac763c09b63

workflow graph Run genomic CMsearch

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_gcmsearch.cwl

Branch/Commit ID: 2801ce53744a085580a8de91cd007c45146b51e8

workflow graph wgs alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_wgs_gvcf.cwl

Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5

workflow graph tt_univec_wnode.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_univec_wnode.cwl

Branch/Commit ID: 90a321ecf2d049330bcf0657cc4d764d2c3f42dd

workflow graph blast_and_filter_workflow.cwl

https://github.com/sapojnik/av_screen_x.git

Path: progs/blast_and_filter_workflow.cwl

Branch/Commit ID: 2f464b439b914c05b2a3e3b2f9fcab3657f33ca2

workflow graph readme-assembly-workflow.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: flow_create_readme/readme-assembly-workflow.cwl

Branch/Commit ID: b1e1b906fcfb2c0fad8811fb8ab03009282c1d19

workflow graph STAR-Alignment-PE

This workflow aligns the fastq files using STAR for no spliced genomes

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Alignments/star-alignment-nosplice.cwl

Branch/Commit ID: 793e327acc1d159ff601043ee88651fca62350dd