Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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bgzip and index VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: db0a91eb094d0a7c58042d4264986ea042dd4827 |
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tt_kmer_compare_wnode
Pairwise comparison |
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: a1f39f21670be28427ceb91ceaeb9339545c18fc |
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fp_filter workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: db0a91eb094d0a7c58042d4264986ea042dd4827 |
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WGS QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 60d8a9e6c5f571ec9b37f10290a1f4613013f3e1 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: e4d6182d5f7a6a880e5f2b21273cf40d25e187df |
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blastp_wnode_struct
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: d40ef1462a4c210be3184609dbb3467ff61fc017 |
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scatter-valuefrom-wf2.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/scatter-valuefrom-wf2.cwl Branch/Commit ID: ad91c844b5adfef514c059af364e20afc935e598 |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 37a3622d1d03812e4f868b5024c52607696bfb75 |
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exome alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 37a3622d1d03812e4f868b5024c52607696bfb75 |
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Subworkflow to allow calling cnvkit with cram instead of bam files
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: 37a3622d1d03812e4f868b5024c52607696bfb75 |
