Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
kmer_top_n
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 89098668413e90519c99b35143bffec509d3599c |
|
|
|
exome alignment and germline variant detection, with optitype for HLA typing
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300 |
|
|
|
Bisulfite alignment and QC
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 040a3d1a719736d7fce6db83702d3fb7f9d69eac |
|
|
|
exome alignment with qc
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae |
|
|
|
ani_top_n
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: 803f6367d1b279a7b6dc1a4e8ae43f1bbec9f760 |
|
|
|
io-int-wf.cwl
|
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/io-int-wf.cwl Branch/Commit ID: 86c46cb397de029e4c91f02cca40fa2b54d22f37 |
|
|
|
umi molecular alignment workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: e0b3c76e38630fb6234414b5adebfb6a4fb23117 |
|
|
|
sec-wf.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf.cwl Branch/Commit ID: 31aa094dce60cbb176229d6b918bfd5ae09c0390 |
|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 0a9a4ce83b49ed4e7eee5bcc09d83725136a36b0 |
|
|
|
AddBamStatsSomatic_v0_1_0.cwl
|
https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git
Path: janis_pipelines/wgs_somatic/cwl/tools/AddBamStatsSomatic_v0_1_0.cwl Branch/Commit ID: f7f887b84734a932534ed6a4732a48852e6169d4 |
