Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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worldpopulation.cwl
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![]() Path: workflow/cwl/worldpopulation.cwl Branch/Commit ID: f7fb7cb4ad7e2761e60e67d73e29e9e7639ce627 |
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Exome QC workflow
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![]() Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a |
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gatk4_cohort_genotyping.cwl
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![]() Path: genomel/cwl/workflows/variant_calling/gatk4_cohort_genotyping.cwl Branch/Commit ID: c661469505c606e1353f23c21a6654724a9d8d63 |
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WGS QC workflow
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![]() Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a |
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Detect Variants workflow
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![]() Path: detect_variants/detect_variants.cwl Branch/Commit ID: ab3cc1f460146c60d7de417508f0c1ea70506e6a |
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kmer_cache_store
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![]() Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 70e530b65b33301032b7510095d89e497bf5e34e |
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workflow-blast-phobius.cwl
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![]() Path: workflows/workflow-blast-phobius.cwl Branch/Commit ID: f867131c9646cde56828c4d8999114f5ca958be9 |
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umi molecular alignment workflow
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![]() Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 43c790e2ee6a0f3f42e40fb4d9a9005eb8de747a |
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readme-genePrediction-workflow.cwl
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![]() Path: flow_create_readme/readme-genePrediction-workflow.cwl Branch/Commit ID: 0b58c250e8ab7c5efae29443f08ea74316127041 |
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wf_trim_and_map_se.cwl
This workflow takes in appropriate trimming params and demultiplexed reads, and performs the following steps in order: trimx1, trimx2, fastq-sort, filter repeat elements, fastq-sort, genomic mapping, sort alignment, index alignment, namesort, PCR dedup, sort alignment, index alignment |
![]() Path: cwl/wf_trim_and_map_se.cwl Branch/Commit ID: b389f7fe3e76cb6e3f31c3a8e2e3b59bb400e74c |