Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	directory.cwl Inspect provided directory and return filenames. Generate a new directory and return it (including content).	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/directory.cwl Branch/Commit ID: 9f3b9e7b74d5a904b12674dfd1300b56a48c3d33
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5
	kmer_seq_entry_extract_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: a79cec2331b3e17e382e8e5040405e8dd750c639
	Merge, annotate, and generate a TSV for SVs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	format_rrnas_from_seq_entry	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: b360e89d85d83ba3b863bf86074c0ec7e5c58f48
	kmer_gc_extract_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_gc_extract_wnode.cwl Branch/Commit ID: a79cec2331b3e17e382e8e5040405e8dd750c639
	sec-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf.cwl Branch/Commit ID: 9f3b9e7b74d5a904b12674dfd1300b56a48c3d33
	kfdrc_rgbam_to_realnbam.cwl	https://github.com/inab/kf-alignment-workflow.git Path: subworkflows/kfdrc_rgbam_to_realnbam.cwl Branch/Commit ID: cbf58e7ccb096f72b9804ea924c5405b29ec87df
	sec-wf-out.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf-out.cwl Branch/Commit ID: 9f3b9e7b74d5a904b12674dfd1300b56a48c3d33
	adapter for sequence_align_and_tag Some workflow engines won't stage files in our nested structure, so parse it out here	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f