Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
wgs alignment and germline variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_wgs_gvcf.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f |
|
|
|
Replace legacy AML Trio Assay
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/aml_trio_cle.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325 |
|
|
|
alignment for nonhuman with qc
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_wgs_nonhuman.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f |
|
|
|
wgs alignment with qc
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19 |
|
|
|
Whole genome alignment and somatic variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19 |
|
|
|
Detect DoCM variants
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 9cbf2a483e1b9e4cdb8e2564be27a9e64fc1169e |
|
|
|
gathered exome alignment and somatic variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_gathered.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19 |
|
|
|
joint genotyping for trios or small cohorts
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/joint_genotype.cwl Branch/Commit ID: 9cbf2a483e1b9e4cdb8e2564be27a9e64fc1169e |
|
|
|
phase VCF
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 9cbf2a483e1b9e4cdb8e2564be27a9e64fc1169e |
|
|
|
exome alignment and tumor-only variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_exome.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19 |
