Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wf_demultiplex_se.cwl

This workflow takes in single-end reads, and performs the following steps in order: demux_se.cwl (does not actually demux for single end, but mirrors the paired-end processing protocol)

https://github.com/YeoLab/eclip.git

Path: cwl/wf_demultiplex_se.cwl

Branch/Commit ID: 3a48ffd84d54d09367d5506c1216e9dba50ef9c9
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/examples/1st-workflow.cwl

Branch/Commit ID: 7c7615c44b80f8e76e659433f8c7875603ae0b25
workflow graph readgroups_bam_to_readgroups_fastq_lists.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroups_bam_to_readgroups_fastq_lists.cwl

Branch/Commit ID: 0c1a40ea1efb1656644ccec0b7abe659539340e7
workflow graph readgroup_fastq_se.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroup_fastq_se.cwl

Branch/Commit ID: 0c1a40ea1efb1656644ccec0b7abe659539340e7
workflow graph readgroup_fastq_pe.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroup_fastq_pe.cwl

Branch/Commit ID: 0c1a40ea1efb1656644ccec0b7abe659539340e7
workflow graph scatter-wf2.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-wf2.cwl

Branch/Commit ID: 65aedc5e7e1f3ccace7f9022f8a54b3f0d5c9a8c
workflow graph step-valuefrom-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/step-valuefrom-wf.cwl

Branch/Commit ID: ae401a813472ca453a99ad067a5e6fc3bd71112b
workflow graph Per-chromosome pindel

https://github.com/genome/cancer-genomics-workflow.git

Path: pindel/pindel_cat.cwl

Branch/Commit ID: 3e84098f77686523fe3dbb807b35450b56501c59
workflow graph step-valuefrom3-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/step-valuefrom3-wf.cwl

Branch/Commit ID: 4635090ef98247b1902b3c7a25c007d9db1cb883
workflow graph extract_readgroup_fastq_pe.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroup_fastq_pe.cwl

Branch/Commit ID: a57b8f0d8708078e87f13297e065d72db10e38a0