Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55

workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55

workflow graph readgroups_bam_to_readgroups_fastq_lists.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroups_bam_to_readgroups_fastq_lists.cwl

Branch/Commit ID: d6c0acb0a5e8546dc96463c9d184ca96548e22b3

workflow graph super-enhancer.cwl

Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl)

https://github.com/datirium/workflows.git

Path: workflows/super-enhancer.cwl

Branch/Commit ID: db6abb2735f87614b870fca9990d36ea786cbbce

workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: 251343ee5b7586ba2cf89458555f1da87a7558f2

workflow graph apercal.cwl

https://github.com/apertif/apercal.git

Path: cwl/apercal.cwl

Branch/Commit ID: c6a8776bc6405f49554b0b62e1148fad2017eaf0

workflow graph 1st-workflow.cwl

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: demo_workflow3/1st-workflow.cwl

Branch/Commit ID: 06dc1e7eed6720a5289faf0a00af73df843900e2

workflow graph bam-bedgraph-bigwig.cwl

Workflow converts input BAM file into bigWig and bedGraph files

https://github.com/Barski-lab/workflows.git

Path: subworkflows/bam-bedgraph-bigwig.cwl

Branch/Commit ID: 7f5ba081a98fccf9210623d4cef2b5feb7a55e5d

workflow graph wf52.cwl

https://github.com/NCATS-Tangerine/ros.git

Path: ros/wf5/wf52.cwl

Branch/Commit ID: be5d4bc5c179f1290c7a504cdf83bb1c3d5fe014

workflow graph workflow-ebisearch.cwl

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-ebisearch.cwl

Branch/Commit ID: 7c2c01c23d7a68a4f0c608881280576d65a01325