Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph gp_makeblastdb

https://github.com/ncbi/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: 23f0ee7a36649ab37cabdd9277b7c82d098be79c

workflow graph Bisulfite alignment and QC

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/bisulfite.cwl

Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5

workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: 641bdeffd942f5121e19626a094c8633386ad546

workflow graph bam to trimmed fastqs and HISAT alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl

Branch/Commit ID: 5a4fed24f01f6d7c7ce1f595b272d82d97d4f9bd

workflow graph conflict-wf.cwl#collision

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/conflict-wf.cwl

Branch/Commit ID: 46947322eb5a99940eb3b5d3088e58f5189398e7

Packed ID: collision

workflow graph search.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/search.cwl

Branch/Commit ID: 819c81af5449ec912bbbbead042ad66b8d3fd8d4

Packed ID: main

workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: 641bdeffd942f5121e19626a094c8633386ad546

workflow graph kfdrc_bwamem_subwf.cwl

https://github.com/kids-first/kf-alignment-workflow.git

Path: dev/ultra-opt/kfdrc_bwamem_subwf.cwl

Branch/Commit ID: 7a7d6a943b504690341efad2c2ff5fea5d9afd0d

workflow graph hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather

https://github.com/ncbi/pgap.git

Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl

Branch/Commit ID: 23f0ee7a36649ab37cabdd9277b7c82d098be79c

workflow graph multi.cwl

https://github.com/gijzelaerr/spiel.git

Path: multi.cwl

Branch/Commit ID: b03d9d2d01804eef3886d07ce6dbfe443f12be9a