Explore Workflows
View already parsed workflows here or click here to add your own
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echo-wf-default.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/echo-wf-default.cwl Branch/Commit ID: 6003cbb94f16103241b562f2133e7c4acac6c621 |
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extract_amplicon_kit.cwl
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![]() Path: workflows/bamfastq_align/extract_amplicon_kit.cwl Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de |
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count-lines1-wf.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: 216fbe57afcf67d81c99b49c1aa3aee0844f0a6a |
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count-lines11-wf.cwl
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![]() Path: v1.0/v1.0/count-lines11-wf.cwl Branch/Commit ID: 3974d544ff77d589a1cde843ea8286e8cea7514d |
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bams2gvcf.woBQSR_female.cwl
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![]() Path: Workflows/bams2gvcf.woBQSR_female.cwl Branch/Commit ID: 9064c301d858a796f8340d1e762e5916fd199da0 |
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extract_amplicon_kit_http.cwl
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![]() Path: workflows/bamfastq_align/extract_amplicon_kit_http.cwl Branch/Commit ID: 51d4f5c34d2cc0ed535e2382c4e458aeefd308de |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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![]() Path: definitions/pipelines/pvacseq.cwl Branch/Commit ID: 4b5970dcf08bac2598e62ffd2673e67a25004c40 |
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any-type-compat.cwl
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![]() Path: v1.0/v1.0/any-type-compat.cwl Branch/Commit ID: 26c8b9ca0ffd37c5f76a46a36315f6fd944833fe |
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count-lines12-wf.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/count-lines12-wf.cwl Branch/Commit ID: 819c81af5449ec912bbbbead042ad66b8d3fd8d4 |
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bam to trimmed fastqs and HISAT alignments
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![]() Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 5c49c5a53259d4c88a02750f1a16a3c02d711115 |