Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: fbeea265295ae596d5a3ba563e766be0c4fc26e8
	bacterial_kmer	https://github.com/ncbi/pgap.git Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: 7ebb8d2757914d16520b00571a281e2ad86a42cf
	SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs.	https://github.com/datirium/workflows.git Path: tools/soupx-subworkflow.cwl Branch/Commit ID: 7fb8a1ebf8145791440bc2fed9c5f2d78a19d04c
	blastp_wnode_struct	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: 7ebb8d2757914d16520b00571a281e2ad86a42cf
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: fbeea265295ae596d5a3ba563e766be0c4fc26e8
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 6949082038c1ad36d6e9848b97a2537aef2d3805
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 17bae57a1f00f5c6db8f3a82d86262f12b8153cf
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 17bae57a1f00f5c6db8f3a82d86262f12b8153cf
	Dockstore.cwl This is a description	https://github.com/kathy-t/test-authors.git Path: Dockstore.cwl Branch/Commit ID: 095ef62ead50ee7972b053d88dfadbb2c906b440
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 6949082038c1ad36d6e9848b97a2537aef2d3805