Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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wgs alignment with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_wgs.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
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PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
https://github.com/ncbi/pgap.git
Path: wf_common.cwl Branch/Commit ID: 16952d6db8571ca56cbf7bd63e11c939945bc145 |
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sum-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/sum-wf.cwl Branch/Commit ID: eb3f25a9e9414a7dba394f7627e02e63d7f1418c |
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foreign_screening.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/foreign_screening.cwl Branch/Commit ID: 22ffe27d9d4a899def7592d75d5871c1856adbdb |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 50d161364e2859ed5c95ef07c9f7234f1431cf31 |
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workflow_input_format_expr_v1_1.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/workflow_input_format_expr_v1_1.cwl Branch/Commit ID: 0b8cfecdb17ed471c74db9f4c0ff190bc75a34f9 |
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exome alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_exome.cwl Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622 |
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md5sum_v11.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/md5sum_v11.cwl Branch/Commit ID: ebd041f35a1179668e9a7490249d651a6cc034b7 |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 60d8a9e6c5f571ec9b37f10290a1f4613013f3e1 |
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count-lines11-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines11-wf.cwl Branch/Commit ID: eb3f25a9e9414a7dba394f7627e02e63d7f1418c |
