Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	blastp_wnode_struct	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: 2801ce53744a085580a8de91cd007c45146b51e8
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 889a077a20c0fdb01f4ed97aa4bc40f920c37a1a
	bwa_index	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/bwa_index.cwl Branch/Commit ID: aaecc710f76be9285288a975cc786e354bc9bedf
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/bwa_mem.cwl Branch/Commit ID: aaecc710f76be9285288a975cc786e354bc9bedf
	cnv_codex CNV CODEX calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/cnv_codex.cwl Branch/Commit ID: aaecc710f76be9285288a975cc786e354bc9bedf
	cnv_gridss CNV GRIDSS calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/cnv_gridss.cwl Branch/Commit ID: aaecc710f76be9285288a975cc786e354bc9bedf
	cnv_manta CNV Manta calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/cnv_manta.cwl Branch/Commit ID: aaecc710f76be9285288a975cc786e354bc9bedf
	final_filtering Final filtering	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/final_filtering.cwl Branch/Commit ID: aaecc710f76be9285288a975cc786e354bc9bedf
	picard_markduplicates Mark duplicates	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/picard_markduplicates.cwl Branch/Commit ID: aaecc710f76be9285288a975cc786e354bc9bedf
	samtools_sort	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/abstract_operations/subworkflows/samtools_sort.cwl Branch/Commit ID: aaecc710f76be9285288a975cc786e354bc9bedf