Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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kmer_seq_entry_extract_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: e351f650524b532f85820b8e53855010b35046c2 |
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tt_fscr_calls_pass1
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https://github.com/ncbi/pgap.git
Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: 1ce371c7412debef75edf09e8830d74ac987a668 |
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Bisulfite alignment and QC
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 0db1a5f1ceedd4416ac550787c27b99c87dbe985 |
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align_sort_sa
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 8aa85573e659ef67163537d6811afdddcfad53dc |
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BAM to BEDPE
Comvert BAM to BEDPE and compress the output |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/bamtobedpe-gzip.cwl Branch/Commit ID: 7364aa3799fd3bd7584049228618301bda53a3af |
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cache_test_workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: 665141f319e6b23bd9924b14844f2e979f141944 |
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Unaligned BAM to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095 |
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iwdr_with_nested_dirs.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/iwdr_with_nested_dirs.cwl Branch/Commit ID: b60a42e3cc417c5b75b88fd7c6681abcc7ff5b89 |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3 |
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kmer_ref_compare_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 68b828ac482956a03325623d817780986f34fb31 |
