Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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fp_filter workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993 |
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umi duplex alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: 72e0bdc1ec449d86df4534132e9a30ad7e9b8afd |
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fastqtosam_pe.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/fastqtosam/fastqtosam_pe.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a |
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extract_capture_kit.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_capture_kit.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a |
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sum-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/sum-wf.cwl Branch/Commit ID: d64178072bc4fc9700ab80cdf90146890b96587e |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: c235dc6d623879a6c4f5fb307f545c9806eb2d23 |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082 |
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mixed_library_metrics.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/mixed_library_metrics.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 5461e63dc4714bb81e1c9f58e436c8465107a199 |
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unix_align_workflow.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: tools/unix/unix_align_workflow.cwl Branch/Commit ID: 2f7c0e92e7b88b57b86602f11c595661c374008a |
