Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph chksum_for_corrupted_fastq_files.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/chksum_for_corrupted_fastq_files.cwl

Branch/Commit ID: 2f4d8651439d2dfae4634021ccd5e8ce3c6465a1

workflow graph format_rrnas_from_seq_entry

https://github.com/ncbi/pgap.git

Path: task_types/tt_format_rrnas_from_seq_entry.cwl

Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49

workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort.cwl

Branch/Commit ID: 07ebbea2bdf97955060c1dd563580b386388519b

workflow graph example_workflow.cwl

https://github.com/Aeolic/example-workflow.git

Path: example_workflow.cwl

Branch/Commit ID: d37c90f4b44e41a573cdc0ad4bd9fd593a880f40

workflow graph bact_get_kmer_reference

https://github.com/ncbi/pgap.git

Path: task_types/tt_bact_get_kmer_reference.cwl

Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49

workflow graph 02-trim-se.cwl

ChIP-seq 02 trimming - reads: SE

https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1

workflow graph 03-map-se.cwl

ChIP-seq 03 mapping - reads: SE

https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/03-map-se.cwl

Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1

workflow graph Seed Search Compartments

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed.cwl

Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49

workflow graph assemble.cwl

Assemble a set of reads using SKESA

https://github.com/ncbi/pgap.git

Path: assemble.cwl

Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785

workflow graph maf-processing-pair.cwl

https://github.com/mskcc/argos-cwl.git

Path: modules/pair/maf-processing-pair.cwl

Branch/Commit ID: 54c9e02751dc65607f0e334c0eb1a5e646cc71d6