Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
workflow.cwl
|
https://github.com/nal-i5k/organism_onboarding.git
Path: flow_md5checksums/workflow.cwl Branch/Commit ID: aa375dcaa5ccfbb4e2aa4433d10948c641b044eb |
|
|
|
workflow.cwl
|
https://github.com/nal-i5k/organism_onboarding.git
Path: flow_dispatch/2other_species/workflow.cwl Branch/Commit ID: aa375dcaa5ccfbb4e2aa4433d10948c641b044eb |
|
|
|
exome alignment with qc
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: fbeea265295ae596d5a3ba563e766be0c4fc26e8 |
|
|
|
HS Metrics workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: fbeea265295ae596d5a3ba563e766be0c4fc26e8 |
|
|
|
running cellranger mkfastq and count
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983 |
|
|
|
Unaligned to aligned BAM
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: ef7f3345b352319ec22dffba26c79df033b141f9 |
|
|
|
Subworkflow to allow calling cnvkit with cram instead of bam files
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037 |
|
|
|
Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: fbeea265295ae596d5a3ba563e766be0c4fc26e8 |
|
|
|
Vcf concordance evaluation workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_eval_concordance.cwl Branch/Commit ID: 061d3a2fbcd8a1c39c0b38c549e528deb24a9d54 |
|
|
|
Subworkflow that runs cnvkit in single sample mode and returns a vcf file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 061d3a2fbcd8a1c39c0b38c549e528deb24a9d54 |
