Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 5cb188131f786ed33156e2f0e3dd63ab9c04245d
	Filter Protein Seeds I; Find ProSplign Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_compart_filter_prosplign.cwl Branch/Commit ID: f76a7f4a81ef4e60fa9a3964445162c92bf3d57c
	Unaligned BAM to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: e56f1024306aeb427d8aae2fff715ed2e8b8f86f
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: e2a34d2b8c406db9aed8e49e8bdcf36f51444379
	module-6	https://github.com/mskcc/roslin-variant.git Path: setup/cwl/module-6.cwl Branch/Commit ID: f1d57f1774b959979ed590c89e11f05b2c639d7c
	Detect DoCM variants	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095
	Unaligned BAM to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: dc2c019c1aa24cc01b451a0f048cf94a35f163c4
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79
	steplevel-resreq.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/steplevel-resreq.cwl Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8
	Unaligned BAM to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00