Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: da35c7b700912dd3643e3dd2c5c96b7be3a4edad
	default-dir5.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/default-dir5.cwl Branch/Commit ID: d64178072bc4fc9700ab80cdf90146890b96587e
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082
	wgs alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/wgs_alignment.cwl Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993
	Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082
	HS Metrics workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082