Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Execute CRISPR
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https://github.com/ncbi/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: cabb1a9a95244e93294727be8cf5816c38992cb0 |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: f76a7f4a81ef4e60fa9a3964445162c92bf3d57c |
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01-qc-se.cwl
RNA-seq 01 QC - reads: SE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/01-qc-se.cwl Branch/Commit ID: 33385c6a820a9d4d18cff6fc3a533ec8e3c11c6e |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79 |
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Run pindel on provided region
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00 |
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Per-region pindel
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 441b85003fdc10cf4cbf333d89acb4d23b0fef32 |
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wgetkegg_wf.cwl
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https://github.com/manabuishii/wgetkegg.git
Path: wgetkegg_wf.cwl Branch/Commit ID: 4a06d046afb651b9bdebf7ea2c0fdead89dced24 |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: a670f323e77e02d9b77be9a13d73d5276dd3676c |
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Prepare user input
Prepare user input for NCBI-PGAP pipeline |
https://github.com/ncbi/pgap.git
Path: prepare_user_input2.cwl Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79 |
