Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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sc_atac_seq_prep_process_init.cwl
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https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git
Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl Branch/Commit ID: 14985c972d540929cacbdf33925af2d4c6c9edb1 |
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wgs alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 669166450aba26f3560c15960eeebdd0313a7f84 |
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TAP
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https://github.com/MG-RAST/amplicon.git
Path: CWL/Workflows/tap.euk.workflow.cwl Branch/Commit ID: 107cdd243d21449459a2126ddc7a365da64a74c0 |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 6bfb64375e7ebb6eb40f463ede86d8deccdb9eff |
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workflow_input_sf_expr_v1_1.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/workflow_input_sf_expr_v1_1.cwl Branch/Commit ID: 513bf79c9e3ba98306006a87165de18bac7c04ee |
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downsample unaligned BAM and align
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https://github.com/genome/cancer-genomics-workflow.git
Path: unaligned_bam_to_bqsr/downsample_workflow.cwl Branch/Commit ID: e497d1553498eb1c6daecf242ed4fa1375a892fd |
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scatter-wf4.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/scatter-wf4.cwl Branch/Commit ID: e4d42b85d24cd5088e14cc31d67c2dee0c6fc40a Packed ID: main |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 60d8a9e6c5f571ec9b37f10290a1f4613013f3e1 |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36 |
