Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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Exome QC workflow
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![]() Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: e56f1024306aeb427d8aae2fff715ed2e8b8f86f |
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Hello World
Outputs a message using echo |
![]() Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 10492acee927c177933160f6ad67085f9112b0d1 |
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scatter-valuefrom-wf5.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf5.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83 |
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protein_extract
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![]() Path: progs/protein_extract.cwl Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79 |
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step-valuefrom3-wf.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/step-valuefrom3-wf.cwl Branch/Commit ID: 9e7c68c0834645ba53a7e2b5f70d53df9d051c92 |
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count-lines11-wf.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/count-lines11-wf.cwl Branch/Commit ID: 6300a49ec29be956ab451311fe9781522f461aee |
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Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)
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![]() Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: f76a7f4a81ef4e60fa9a3964445162c92bf3d57c |
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Metrics sub-workflow
Align RNA-seq data for each sample using STAR. |
![]() Path: amp-rnaseq_reprocessing/amp-rnaseq_reprocess-workflow/wf-metrics.cwl Branch/Commit ID: 50e640ce16be4287b2e87381850a211ad3e70dc1 |
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format-maf
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![]() Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl Branch/Commit ID: f1d57f1774b959979ed590c89e11f05b2c639d7c |
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mutect panel-of-normals workflow
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![]() Path: definitions/pipelines/panel_of_normals.cwl Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9 |