Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Exome QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_exome.cwl

Branch/Commit ID: e56f1024306aeb427d8aae2fff715ed2e8b8f86f
workflow graph Hello World

Outputs a message using echo

 https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/hello-workflow.cwl

Branch/Commit ID: 10492acee927c177933160f6ad67085f9112b0d1
workflow graph scatter-valuefrom-wf5.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf5.cwl

Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79
workflow graph step-valuefrom3-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/step-valuefrom3-wf.cwl

Branch/Commit ID: 9e7c68c0834645ba53a7e2b5f70d53df9d051c92
workflow graph count-lines11-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines11-wf.cwl

Branch/Commit ID: 6300a49ec29be956ab451311fe9781522f461aee
workflow graph Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass3.cwl

Branch/Commit ID: f76a7f4a81ef4e60fa9a3964445162c92bf3d57c
workflow graph Metrics sub-workflow

Align RNA-seq data for each sample using STAR.

https://github.com/Sage-Bionetworks/amp-workflows.git

Path: amp-rnaseq_reprocessing/amp-rnaseq_reprocess-workflow/wf-metrics.cwl

Branch/Commit ID: 50e640ce16be4287b2e87381850a211ad3e70dc1
workflow graph format-maf

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl

Branch/Commit ID: f1d57f1774b959979ed590c89e11f05b2c639d7c
workflow graph mutect panel-of-normals workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/panel_of_normals.cwl

Branch/Commit ID: 479c9b3e3fa32ec9c7cd4073cfbccc675fd254d9