Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Tumor-Only Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983
	Create Genomic Collection for Bacterial Pipeline, ASN.1 input	https://github.com/ncbi/pgap.git Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919
	scatter-valuefrom-wf6.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf6.cwl Branch/Commit ID: 9e7c68c0834645ba53a7e2b5f70d53df9d051c92
	Super-enhancer post ChIP-Seq analysis Super-enhancers, consist of clusters of enhancers that are densely occupied by the master regulators and Mediator. Super-enhancers differ from typical enhancers in size, transcription factor density and content, ability to activate transcription, and sensitivity to perturbation. Use to create stitched enhancers, and to separate super-enhancers from typical enhancers using sequencing data (.bam) given a file of previously identified constituent enhancers (.gff)	https://github.com/datirium/workflows.git Path: workflows/super-enhancer.cwl Branch/Commit ID: ddc35c559d1ac6aab4972fe1a2b63300c4373f54
	Non-Coding Bacterial Genes	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919
	scatter-valuefrom-wf6.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf6.cwl Branch/Commit ID: 6300a49ec29be956ab451311fe9781522f461aee
	iwdr_with_nested_dirs.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/iwdr_with_nested_dirs.cwl Branch/Commit ID: 62ae25772a8e98b6591554882daa3f3758079fca
	Hello World Outputs a message using echo	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 0184e647cde1bc44279107d6df31b3ebb138769c
	spurious_annot pass2	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79