Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
xenbase-rnaseq-pe.cwl
XenBase workflow for analysing RNA-Seq paired-end data |
https://github.com/Barski-lab/workflows.git
Path: workflows/xenbase-rnaseq-pe.cwl Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf |
|
|
|
Create Genomic Collection for Bacterial Pipeline, ASN.1 input
|
https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3 |
|
|
|
Run tRNAScan
|
https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3 |
|
|
|
Non-Coding Bacterial Genes
|
https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3 |
|
|
|
bacterial_kmer
|
https://github.com/ncbi/pgap.git
Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3 |
|
|
|
Salmon quantification, FASTQ -> H5AD count matrix
|
https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git
Path: salmon-rnaseq/steps/salmon-quantification.cwl Branch/Commit ID: a33bc8a604b9533fb1a2627ec06cee0eb86133b2 |
|
|
|
kmer_seq_entry_extract_wnode
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 68b828ac482956a03325623d817780986f34fb31 |
|
|
|
xenbase-fastq-bowtie-bigwig-se-pe.cwl
|
https://github.com/Barski-lab/workflows.git
Path: subworkflows/xenbase-fastq-bowtie-bigwig-se-pe.cwl Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf |
|
|
|
setup.cwl
|
https://git.astron.nl/RD/VLBI-cwl.git
Path: workflows/setup.cwl Branch/Commit ID: 86441858fc31364cfa9d3da6a653c155591126dd |
|
|
|
Detect Variants workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants_mouse.cwl Branch/Commit ID: 3042812447d9e8889c6118986490e9c9b9b13223 |
