Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Resize sentinel2ard collection
Resize sentinel2ard collection |
https://github.com/EO-DataHub/eodh-training.git
Path: cwl/resize-sentinel2ard.cwl Branch/Commit ID: a2272a943ecce59c624e5016cc5d3f392c99ceff Packed ID: resize-sentinel2ard |
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Dockstore.cwl
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https://github.com/GA4GH-DREAM/dockstore-workflow-helloworld.git
Path: Dockstore.cwl Branch/Commit ID: 1.0.0 |
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rp2-to-rp2path.cwl
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https://github.com/alaninmcr/test-cwl.git
Path: workflows/rp2-to-rp2path.cwl Branch/Commit ID: 98d5e21affae77ec12ecf300 |
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gathered exome alignment and somatic variant detection for cle purpose
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/gathered_cle_somatic_exome.cwl Branch/Commit ID: a93be3183c2218ee50f13ae2675dd1cde563fdbc |
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Nested workflow example
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/nested.cwl Branch/Commit ID: 31aa094dce60cbb176229d6b918bfd5ae09c0390 |
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heatmap-prepare.cwl
Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order. |
https://github.com/Barski-lab/workflows.git
Path: tools/heatmap-prepare.cwl Branch/Commit ID: 0d919fc3a2f4e4c105142df04d74ac934e3c8c03 |
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tt_univec_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: 42df0c0f9a4e5697abadd9cb52440691fafc8f5d |
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annotate.cwl
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https://github.com/hubmapconsortium/hra-workflows.git
Path: steps/annotate.cwl Branch/Commit ID: f44151f2eae461c916916cc3e323ad909c3900c6 |
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umi duplex alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: ec45fad68ca10fb64d5c58e704991b146dc31d28 |
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rnaseq-se.cwl
Runs RNA-Seq BioWardrobe basic analysis with single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/rnaseq-se.cwl Branch/Commit ID: a84cefded73e7c864ee2b6c7ab0604a0397462ec |
