Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cache_test_workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/cache_test_workflow.cwl

Branch/Commit ID: 544f108b906c179520b0a6d64c3c21d168b48fa2
workflow graph scatter-wf1_v1_0.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/scatter-wf1_v1_0.cwl

Branch/Commit ID: 02d6dbd3d48d50adfd4afb1f7d92e8a4284bcab9
workflow graph fasta2taxa-plot

Input is a fasta file with n>1 samples, with sample id as sequence identifier prefix, and a sample id file. The workflow calls open otus and assigns taxa using greengenes. The output are taxa plots.

https://github.com/MG-RAST/qiime-pipeline.git

Path: CWL/Workflows/qiime/join-reads2plot.cwl

Branch/Commit ID: ea3f99c0fc58d161e068bd5077c362768e534b92
workflow graph gp_makeblastdb

https://github.com/ncbi/pgap.git

Path: progs/gp_makeblastdb.cwl

Branch/Commit ID: 16952d6db8571ca56cbf7bd63e11c939945bc145
workflow graph screen out taxa

Remove sequences which align against a reference set using bowtie2. The references are preformatted (index files)

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/organism-screening.workflow.cwl

Branch/Commit ID: 8698ae242c1f7addf0003663192bb43d7cd36d09
workflow graph workflow_inputs.cwl

https://github.com/common-workflow-lab/wdl-cwl-translator.git

Path: wdl2cwl/tests/cwl_files/workflow_inputs.cwl

Branch/Commit ID: b53883ca9d60b30c3b970f438d20c2fea31948b7
workflow graph trnascan_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_scan_and_dump.cwl

Branch/Commit ID: 16952d6db8571ca56cbf7bd63e11c939945bc145
workflow graph step-valuefrom2-wf_v1_1.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step-valuefrom2-wf_v1_1.cwl

Branch/Commit ID: f14ff6a51d14430b4d02ee1d352a19644d231113
workflow graph step-valuefrom3-wf_v1_1.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step-valuefrom3-wf_v1_1.cwl

Branch/Commit ID: 02d6dbd3d48d50adfd4afb1f7d92e8a4284bcab9
workflow graph map-ordering-v1_0.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/map-ordering-v1_0.cwl

Branch/Commit ID: 88ad2a6ad70d7124b094e0cb3e5f72b78078c7e2