Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Prepare user input Prepare user input for NCBI-PGAP pipeline	https://github.com/ncbi/pgap.git Path: prepare_user_input2.cwl Branch/Commit ID: af78bfbc7625a817a2875e87c8ee267cf46b8c57
	Bisulfite QC tools	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: f615832615c3b41728df8e47b72ef11e37e6a9e5
	count-lines8-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl Branch/Commit ID: d7cd45f7072960d264962ecc5a04d7c219f65c06
	Run genomic CMsearch (5S rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 6d04f5d65d1d4893706d9ae7e27341633333054f
	QIIME2 Step 1 paired end sequences QIIME2 Import and Demux Step 1 paired end sequences	https://github.com/bespin-workflows/16s-qiime2.git Path: 16s-step1-import-demux-paired.cwl Branch/Commit ID: a6a7d5bd034f8ccf01b809bc9f5ecf87e5c5652c
	count-lines8-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl Branch/Commit ID: e9c83739a93fa0b18f8dea2f98b632a9e32725c9
	scatter-valuefrom-wf2.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf2.cwl Branch/Commit ID: d7cd45f7072960d264962ecc5a04d7c219f65c06
	blastp_wnode_naming	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: af78bfbc7625a817a2875e87c8ee267cf46b8c57
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 2ae0a374fab650757cdae4391c8cbd32f02edf97
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/revsort.cwl Branch/Commit ID: d7cd45f7072960d264962ecc5a04d7c219f65c06