Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph taxcheck.cwl

Perform taxonomic identification tasks on an input genome

https://github.com/ncbi/pgap.git

Path: taxcheck.cwl

Branch/Commit ID: f225cd99b0e0a5043dd102f8b33a6139fefe9ea4
workflow graph mut.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mut.cwl

Branch/Commit ID: 227f35a5ed50c423afba2353871950aa61d58872
workflow graph directory.cwl

Inspect provided directory and return filenames. Generate a new directory and return it (including content).

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/directory.cwl

Branch/Commit ID: fc6ca8b1498926f705dcfde7ab0a365bd09a9675
workflow graph extract_gencoll_ids

https://github.com/ncbi/pgap.git

Path: task_types/tt_extract_gencoll_ids.cwl

Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3
workflow graph assemble.cwl

Assemble a set of reads using SKESA

https://github.com/ncbi/pgap.git

Path: assemble.cwl

Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3
workflow graph Chipseq alignment for mouse with qc and creating homer tag directory

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/chipseq_alignment_mouse.cwl

Branch/Commit ID: c23dc7f113ca0b0a3127a5d6c696e98d4799460c
workflow graph helloworld.cwl

https://github.com/reanahub/reana-demo-helloworld.git

Path: workflow/cwl/helloworld.cwl

Branch/Commit ID: 168e176b6b324d1cdca9f3f9fa4e1e88a79ce367
workflow graph umi molecular alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/umi_molecular_alignment.cwl

Branch/Commit ID: e649fcb1092905c539be026a3f23c82d5b0871d2
workflow graph spurious_annot pass2

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass2.cwl

Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3
workflow graph spurious_annot

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass1.cwl

Branch/Commit ID: 68311dd5328bf6b782a370a0253b41062a3359a3