Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	PGAP Pipeline PGAP pipeline for external usage, powered via containers	https://github.com/ncbi/pgap.git Path: wf_common.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4
	Chipseq alignment for mouse with qc and creating homer tag directory	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/chipseq_alignment_mouse.cwl Branch/Commit ID: 06d2440d115b446c299b4ce96e8812d2f8df86ec
	RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416
	maf-processing-pair.cwl	https://github.com/mskcc/argos-cwl.git Path: modules/pair/maf-processing-pair.cwl Branch/Commit ID: 2fc732c760a728b6f21336bfdd30e1b7d7ff4473
	RNA-Seq alignment and transcript/gene abundance workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: 06d2440d115b446c299b4ce96e8812d2f8df86ec
	wf_get_peaks_se.cwl	https://github.com/YeoLab/eclip.git Path: cwl/wf_get_peaks_se.cwl Branch/Commit ID: b2b95f58f96ee5b34bd9b342d0ecda63d135e278
	vecscreen.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/vecscreen.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a