Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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Run pindel on provided region
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![]() Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: e8b7759826df40b8bb821b40b15aea960a4951c4 |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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![]() Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 1a6b9e5dea09caa0debbaff30ca39005dfa5e4d4 |
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process VCF workflow
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![]() Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd |
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Raw sequence data to BQSR
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![]() Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0 |
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Per-region pindel
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![]() Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
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varscan somatic workflow
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![]() Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
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bgzip and index VCF
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![]() Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 742dbafb5fb103d8578f48a0576c14dd8dae3b2a |
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HS Metrics workflow
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![]() Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: d3e4bf55753cd92f97537c7d701187ea92d1e5f0 |
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wf_clipseqcore_se_1barcode.cwl
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![]() Path: cwl/wf_clipseqcore_se_1barcode.cwl Branch/Commit ID: b2b95f58f96ee5b34bd9b342d0ecda63d135e278 |
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Unaligned BAM to BQSR
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![]() Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416 |