Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome.cwl Branch/Commit ID: 7f9dfad8e45ca096ae738cff646195b2b1ba7d7f |
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count-lines11-extra-step-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines11-extra-step-wf-noET.cwl Branch/Commit ID: 5e3fac092a720c5670ae3e787eabe1aaade71d83 |
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Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 16d1198871195e2229fd44dd0ad94a4ed6a87caf |
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pipeline-se-blacklist-removal.cwl
ATAC-seq pipeline - reads: SE - with blacklist removal |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/pipeline-se-blacklist-removal.cwl Branch/Commit ID: c50b80e9b0eaaf4613f9feca44b3463bbfd288d5 |
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alignment_bwa_mem_no_trim.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_bwa_mem_no_trim.cwl Branch/Commit ID: 286bce04c474d28bddeb7dbe43ab8d59919fe855 |
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js_output_workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/js_output_workflow.cwl Branch/Commit ID: e4d42b85d24cd5088e14cc31d67c2dee0c6fc40a |
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workflow_input_format_expr_v1_1.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/workflow_input_format_expr_v1_1.cwl Branch/Commit ID: 141048ae4b78aa765782bb752be4a1550edc2eea |
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alignment_prep.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_prep.cwl Branch/Commit ID: d777030ca3654fe78462ee69adcbd8221303b006 |
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chipseq-se.cwl
Runs ChIP-Seq BioWardrobe basic analysis with single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/chipseq-se.cwl Branch/Commit ID: 2d54a7edc45b7dfbee41ecef200a634fd0cd5e97 |
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count-lines4-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl Branch/Commit ID: b3639a4c5075abc562b7f9b816be0d4f7d711703 |
