Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	portal-workflow.cwl	https://github.com/mskcc/pluto-cwl.git Path: cwl/portal-workflow.cwl Branch/Commit ID: ba3ff09328cc646d7254b2d2ee0fbe1abca3d4ad
	createindex.cwl	https://github.com/yyoshiaki/virtus.git Path: workflow/createindex.cwl Branch/Commit ID: 16dbe9d99137cbfee834fc22b79190f812543f7e
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f
	foreign_screening.cwl	https://github.com/ncbi/pgap.git Path: vecscreen/foreign_screening.cwl Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747
	msi_workflow.cwl Workflow to run the MSI analysis on a batch of samples and merge the results back into a single data clinical file	https://github.com/mskcc/pluto-cwl.git Path: cwl/msi_workflow.cwl Branch/Commit ID: ba3ff09328cc646d7254b2d2ee0fbe1abca3d4ad
	bulk_analysis.cwl	https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git Path: steps/bulk_analysis.cwl Branch/Commit ID: 97586613d396c4389d013cc46e37fc7aa5974f28
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f
	tmb.cwl Workflow for calculating TMB tumor mutational burden on a single sample	https://github.com/mskcc/pluto-cwl.git Path: cwl/tmb.cwl Branch/Commit ID: ba3ff09328cc646d7254b2d2ee0fbe1abca3d4ad
	VIRTUS.PE.singlevirus.cwl	https://github.com/yyoshiaki/VIRTUS.git Path: workflow/VIRTUS.PE.singlevirus.cwl Branch/Commit ID: 16dbe9d99137cbfee834fc22b79190f812543f7e
	Running cellranger count and lineage inference	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f