Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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prefactor_calibrator.cwl
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https://git.astron.nl/eosc/prefactor3-cwl.git
Path: workflows/prefactor_calibrator.cwl Branch/Commit ID: ff44301915ea501db58597c5fbc813a4e6cca26e |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 2353ee2550529ca5b0705c94b32022a21713db18 |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f |
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cnv_gridss
CNV GRIDSS calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/cnv_gridss.cwl Branch/Commit ID: 0c8080efe81a46cb3d0964ab1284b5bd053a793d |
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CODEX analysis pipeline using Cytokit
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https://github.com/hubmapconsortium/codex-pipeline.git
Path: steps/illumination_first_stitching.cwl Branch/Commit ID: d8efe116c9fd79d21646ec215799b52b95dfd709 |
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workflow.cwl
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https://github.com/Sage-Bionetworks-Challenges/Anti-PD1-DREAM-Infrastructure.git
Path: workflow.cwl Branch/Commit ID: a67b1e6c55604f6a3b8bba5c9dffd05594a0d5ef |
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gcaccess_from_list
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https://github.com/ncbi/pgap.git
Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 8fbfb03088968846bb2c0a79ac50b231b43db64f |
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heatmap.cwl
Generates ATDP heatmap centered on TSS from an array of input BAM files and genelist TSV file. Returns array of heatmap JSON files with the names that have the same basenames as input BAM files, but with .json extension |
https://github.com/Barski-lab/workflows.git
Path: workflows/heatmap.cwl Branch/Commit ID: 812b0ff40dda18ab7a9a872ff13a577be8531ba6 |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747 |
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umi per-lane alignment subworkflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 1750cd5cc653f058f521b6195e3bec1e7df1a086 |
