Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	download_quality_control.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/sra/download_quality_control.cwl Branch/Commit ID: 0207b0171ab142dfb85db9c39050c5b4be51dd9e
	cache_asnb_entries	https://github.com/ncbi/pgap.git Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49
	Run tRNAScan	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49
	03-map-se.cwl ATAC-seq 03 mapping - reads: SE	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/03-map-se.cwl Branch/Commit ID: 487af88ef0b971f76ecd1a215639bb47e3ee94e1
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5
	LSU-from-tablehits.cwl	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: tools/LSU-from-tablehits.cwl Branch/Commit ID: 7bb76f33bf40b5cd2604001cac46f967a209c47f
	wf_get_peaks_pe.cwl	https://github.com/YeoLab/eclip.git Path: cwl/wf_get_peaks_pe.cwl Branch/Commit ID: b389f7fe3e76cb6e3f31c3a8e2e3b59bb400e74c
	bwa-alignment.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Alignments/bwa-alignment.cwl Branch/Commit ID: 0207b0171ab142dfb85db9c39050c5b4be51dd9e
	chksum_for_corrupted_fastq_files.cwl	https://github.com/cancerit/workflow-seq-import.git Path: cwls/chksum_for_corrupted_fastq_files.cwl Branch/Commit ID: 2f4d8651439d2dfae4634021ccd5e8ce3c6465a1
	format_rrnas_from_seq_entry	https://github.com/ncbi/pgap.git Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49