Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Non-Coding Bacterial Genes

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_bacterial_noncoding.cwl

Branch/Commit ID: 6d04f5d65d1d4893706d9ae7e27341633333054f
workflow graph extract other ncrnas!

https://github.com/kinow/pipeline-v5.git

Path: workflows/subworkflows/other_ncrnas.cwl

Branch/Commit ID: 337033417c49dcf4ab394aba1ec517b97637da13
workflow graph kmer_build_tree

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_build_tree.cwl

Branch/Commit ID: f76a7f4a81ef4e60fa9a3964445162c92bf3d57c
workflow graph l1b_workflow.cwl

https://github.com/anilnatha/sounder-sips-application.git

Path: cwl/l1b_workflow.cwl

Branch/Commit ID: main
workflow graph kmer_top_n_extract

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_top_n_extract.cwl

Branch/Commit ID: 068222510fdab75046c7f733a0cc919e36744ade
workflow graph PGAP Pipeline

PGAP pipeline for external usage, powered via containers

 https://github.com/ncbi/pgap.git

Path: wf_common.cwl

Branch/Commit ID: 068222510fdab75046c7f733a0cc919e36744ade
workflow graph exome alignment with qc, no bqsr, no verify_bam_id

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_exome_nonhuman.cwl

Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405
workflow graph umi duplex alignment workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/duplex_alignment.cwl

Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2
workflow graph wgs alignment with qc

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/wgs_alignment.cwl

Branch/Commit ID: ad65dc1dfff9afa5077f498b85e699716c47f6cb
workflow graph bacterial_kmer

https://github.com/ncbi/pgap.git

Path: bacterial_kmer/wf_bacterial_kmer.cwl

Branch/Commit ID: 068222510fdab75046c7f733a0cc919e36744ade