Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Replace legacy AML Trio Assay

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/aml_trio_cle.cwl

Branch/Commit ID: low-vaf
workflow graph scatter GATK HaplotypeCaller over intervals

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl

Branch/Commit ID: low-vaf
workflow graph Run pindel on provided region

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/pindel_region.cwl

Branch/Commit ID: low-vaf
workflow graph 03-map-pe.cwl

ChIP-seq 03 mapping - reads: PE

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ChIP-seq_pipeline/03-map-pe.cwl

Branch/Commit ID: master
workflow graph bams2gvcf.wBQSR.multisamples.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.wBQSR.multisamples.cwl

Branch/Commit ID: master
workflow graph gvcf-distr.cwl

https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/gvcf-distr.cwl

Branch/Commit ID: master
workflow graph wf-variantcall.cwl

https://github.com/garyluu/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-variantcall.cwl

Branch/Commit ID: master
workflow graph marianas_collapsing_workflow.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/marianas/marianas_collapsing_workflow.cwl

Branch/Commit ID: master
workflow graph 1st-workflow.cwl

https://github.com/golharam/cwl-graph-generate.git

Path: test/1st-workflow.cwl

Branch/Commit ID: master
workflow graph exomeseq-gatk4-02-variantdiscovery.cwl

https://github.com/bespin-workflows/exomeseq-gatk4.git

Path: subworkflows/exomeseq-gatk4-02-variantdiscovery.cwl

Branch/Commit ID: develop