Explore Workflows

Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/rnaseq-se-dutp.cwl

Branch/Commit ID: 89082ba8d398033dee84c37a84c6547466c1f2d2

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/workflow_input_format_expr_v1_1.cwl

Branch/Commit ID: ed26684328ca370c247f549166f3edcb14a2f9e0

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/io-any-wf-1.cwl

Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/packed_no_main.cwl

Branch/Commit ID: 9781b4c89c3126e2b19f6feaf4e7327d71e754e8

Packed ID: collision

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/io-file-default-wf.cwl

Branch/Commit ID: 50251ef931d108c09bed2d330d3d4fe9c562b1c3

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/scatter-valuefrom-wf1.cwl

Branch/Commit ID: 4fa45edd0c445c1cff7dee986d69a31cdd5e5dff

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-dir5.cwl

Branch/Commit ID: a67c898958f6affc8cb9de05fe87c9228a4fc63e

PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)

https://github.com/ncbi/pgap.git

Path: pgap.cwl

Branch/Commit ID: 68b828ac482956a03325623d817780986f34fb31

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/record-output-wf_v1_0.cwl

Branch/Commit ID: ed26684328ca370c247f549166f3edcb14a2f9e0

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/step-valuefrom4-wf.cwl

Branch/Commit ID: 4fa45edd0c445c1cff7dee986d69a31cdd5e5dff