Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Immunotherapy Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/immuno.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a
	Unaligned bam to sorted, markduped bam	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb
	sec-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf.cwl Branch/Commit ID: 78fe9d41ee5a44f8725dfbd7028e4a5ee42949cf
	snaptools_create_snap_file.cwl	https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git Path: steps/snaptools_create_snap_file.cwl Branch/Commit ID: 904fbfbbee5f867a6b642cb225c02386549c49f6
	cram_to_bam workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb
	kmer_compare_wnode	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6
	bulk scRNA-seq pipeline using Salmon	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: bulk-pipeline.cwl Branch/Commit ID: 536d6ed4bc639b93a8d8bc1c1a694b848d4d6f32
	scatter-wf4.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf4.cwl Branch/Commit ID: 9f3b9e7b74d5a904b12674dfd1300b56a48c3d33 Packed ID: main
	umi molecular alignment fastq workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_umi_molecular.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f
	bam to trimmed fastqs and biscuit alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 449bc7e45bb02316d040f73838ef18359e770268