Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and tumor-only variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_exome.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f
	Unaligned to aligned BAM	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 42712bca4c3307d87b6b55f525a4c97cb6f7e288
	kmer_cache_store	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
	Replace legacy AML Trio Assay	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/aml_trio_cle.cwl Branch/Commit ID: 0b6e8fd8ead7644cf5398395b76af5cf4011686f
	echo-wf-default.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/echo-wf-default.cwl Branch/Commit ID: 814bd0405a7701efc7d63e8f0179df394c7766f7
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome_gvcf.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 2229f26ec424f9ebeb3db7fec3bd3f84a38c7485
	bam to trimmed fastqs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: adcae308fdccaa1190083616118dfadb4df65dca
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 195b4ab487c939eb32a55d9f78bc1befd100caae