Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome_mouse.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	transform.cwl	https://github.com/NCI-GDC/gdc-mirnaseq-cwl.git Path: workflows/mirnaseq_automation/transform.cwl Branch/Commit ID: 963f6d502da2c4f152c1654e94008ccf8f6d0db3
	gather AML trio outputs	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/aml_trio_cle_gathered.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 891c996dbd23d8154ec7609a56da3de841ae124c
	rRNA_selection.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/rRNA_selection.cwl Branch/Commit ID: 712de5a25d08e359f831f60d1aedd0f3fd1ca32d
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 2229f26ec424f9ebeb3db7fec3bd3f84a38c7485
	bwa_pe.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/align/bwa_pe.cwl Branch/Commit ID: b06840100b6e8dd4ad5fc1a4d8f2146369cc25bf
	exome alignment and tumor-only variant detection	https://github.com/litd/analysis-workflows.git Path: definitions/pipelines/tumor_only_exome.cwl Branch/Commit ID: 18d8efdc4c97c1c9222f603f529b909b36fa42e7
	count-lines4-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl Branch/Commit ID: 9a8e654a91ea5d26e8452dd1cecf3faf22b7a12e
	taxonomy_check_16S	https://github.com/ncbi/pgap.git Path: task_types/tt_taxonomy_check_16S.cwl Branch/Commit ID: 3a86bee9247fb7ff6cb9fd39e675a62b0429cbf4