Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785
	Unaligned bam to sorted, markduped bam	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	tt_fscr_calls_pass1	https://github.com/ncbi/pgap.git Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: 3897218b16b30a933beecd60a98a300d677207d8
	nestedworkflows.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/examples/nestedworkflows.cwl Branch/Commit ID: 3ae14d5137dd345d76737dd96321b3913db68325
	WGS QC workflow nonhuman	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs_nonhuman.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	trick_revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/trick_revsort.cwl Branch/Commit ID: c7c379948c02ba8f048d157f06eb903b1bda9894
	js-expr-req-wf.cwl#wf	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/js-expr-req-wf.cwl Branch/Commit ID: a70a83fe14a100cd16e2402ec17b2904f5eeb17d Packed ID: wf
	extract_gencoll_ids	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: c08fd46e8f715b9b5aa487466705863e4b1829df
	bact_get_kmer_reference	https://github.com/ncbi/pgap.git Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 33dcc054a8718edad26440f085d73b7c5d7b7871