Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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WGS QC workflow nonhuman
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![]() Path: definitions/subworkflows/qc_wgs_nonhuman.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a |
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SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination
Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs. |
![]() Path: tools/soupx-subworkflow.cwl Branch/Commit ID: 1131f82a53315cca217a6c84b3bd272aa62e4bca |
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any-type-compat.cwl
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![]() Path: tests/any-type-compat.cwl Branch/Commit ID: 6397014050177074c9ccd0d771577f7fa9f728a3 |
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downsample unaligned BAM and align
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![]() Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 77ec4f26eb14ed82481828bd9f6ef659cfd8b40f |
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kmer_top_n_extract
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![]() Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5 |
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Create tagAlign file
This workflow creates tagAlign file |
![]() Path: workflows/File-formats/create-tagAlign.cwl Branch/Commit ID: e541470bc9d0b064bc4ed7dd2b45d8ec67760613 |
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pipeline.cwl
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![]() Path: pipeline.cwl Branch/Commit ID: 91d193f52a0d6c86491812da618face3d5a6ab67 |
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align_merge_sas
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![]() Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 7cee09fb3e33c851e4e1dfc965c558b82290a785 |
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Bisulfite QC tools
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![]() Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 2e0562a5c3cd7aac24af4c622a5ae68a7fb23a71 |
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count-lines1-wf.cwl
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![]() Path: tests/count-lines1-wf.cwl Branch/Commit ID: 5f27e234b4ca88ed1280dedf9e3391a01de12912 |