Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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tt_kmer_top_n.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 5ec226c941562124032ca6861bc8d1aeabf9d91a |
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Run pindel on provided region
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c |
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kmer_top_n_extract
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: f1eb0f4eaaf1661044f28d859f7e8d4302525ead |
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group-isoforms-batch.cwl
Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored. |
https://github.com/datirium/workflows.git
Path: tools/group-isoforms-batch.cwl Branch/Commit ID: 104059e07a2964673e21d371763e33c0afeb2d03 |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c |
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kfdrc_process_pe_set.cwl
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https://github.com/kids-first/kf-alignment-workflow.git
Path: subworkflows/kfdrc_process_pe_set.cwl Branch/Commit ID: 105340db0e99918fd7e8a8e14f1cde3022b44653 |
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scatter-wf4.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-wf4.cwl Branch/Commit ID: 9a8e654a91ea5d26e8452dd1cecf3faf22b7a12e Packed ID: main |
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revsort.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/revsort.cwl Branch/Commit ID: 4fe434e969c93c94b690ba72db295d9d52a6f576 |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 3a822294da63b4e19446a285e2fef075e23cf3d0 |
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format_rrnas_from_seq_entry
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https://github.com/ncbi/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: f1eb0f4eaaf1661044f28d859f7e8d4302525ead |
