Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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gathered exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_gathered.cwl Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601 |
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count-lines1-wf-noET.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines1-wf-noET.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
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wgs alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_wgs.cwl Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601 |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: 8eb189a4a34dc8cd86380685f814c79a444a7601 |
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dynresreq-workflow-stepdefault.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/dynresreq-workflow-stepdefault.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
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CLE gold vcf evaluation workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_eval_cle_gold.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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output-arrays-int-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/output-arrays-int-wf.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
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wgs alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_wgs.cwl Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d |
