Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
pipeline-se.cwl
ATAC-seq pipeline - reads: SE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/pipeline-se.cwl Branch/Commit ID: 8d02684ae0ff27e641f3704686e3bc8b1979b854 |
|
|
|
SSU-from-tablehits.cwl
|
https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: 43d2fb8a5430dc56b55e84e3986d0079cad8d185 |
|
|
|
scatter-wf4.cwl#main
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/scatter-wf4.cwl Branch/Commit ID: 89ccbfc53ff3bb6abe2eb90bb7e0091c54c18f5c Packed ID: main |
|
|
|
Run pindel on provided region
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 389f6edccab082d947bee9c032f59dbdf9f7c325 |
|
|
|
cram_to_bam workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a |
|
|
|
mutect parallel workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 2decd55996b912feb48be5db1b052aa3274ee405 |
|
|
|
Merge, annotate, and generate a TSV for SVs
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a |
|
|
|
align_merge_sas
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: f1eb0f4eaaf1661044f28d859f7e8d4302525ead |
|
|
|
align_sort_sa
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: f1eb0f4eaaf1661044f28d859f7e8d4302525ead |
|
|
|
umi molecular alignment workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c |
