Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_mouse.cwl Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d |
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downsample unaligned BAM and align
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 27dcb1ae121be6a23057b74332b8c752ea425735 |
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step-valuefrom5-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/step-valuefrom5-wf.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
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count-lines15-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines15-wf.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
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no-inputs-wf.cwl
Workflow without inputs. |
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/no-inputs-wf.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
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Bisulfite alignment and QC
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d |
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step-valuefrom2-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/step-valuefrom2-wf.cwl Branch/Commit ID: f24c797ea017a467185b516ea4862c9c494c9d33 |
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Downsample and HaplotypeCaller
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/downsample_and_recall.cwl Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d |
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bact_get_kmer_reference
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 41dfc42a730087189122a2f74b2f547a4665a225 |
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umi duplex alignment fastq workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_umi_duplex.cwl Branch/Commit ID: eb0092603bf57acb7bda08a06e4f2f1e2a8c9b6d |
