Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	QIIME2 Step 2 (DADA2 option) QIIME2 DADA2, feature summaries, phylogenetic diversity tree, taxonomic analysis and ancom	https://github.com/Duke-GCB/bespin-cwl.git Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: ef08cb00bd55b4c712645d171dbc691e01ed6165 Packed ID: main
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: be5ae41801b19ebc69a2889d8fdb39e8e2359611
	mutect parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: bb2f26dfe630179737ec2ff08a8614f1f47abcaf
	protein similarities run diamond on mutlple DBs and merge-sort results	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/protein-diamond.workflow.cwl Branch/Commit ID: 9909eaf02b93bf3c5b20d9dd18a3ec076bc7a934
	Alignment without BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl Branch/Commit ID: b465f0da2806ddb6df481409541d13288ccb40ec
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 9e5f228bc1a3d0dfe950b5d41d7e4319e834a6d4
	kfdrc_process_bam.cwl	https://github.com/kids-first/kf-alignment-workflow.git Path: subworkflows/kfdrc_process_bam.cwl Branch/Commit ID: 09c05e788df9cd77cead39892fd02140faa765a8
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: b12ec8c8e832151033b9e6c0a76a3c3df18d45da
	Merge, annotate, and generate a TSV for SVs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/merge_svs.cwl Branch/Commit ID: 480c438a6a7e78c624712aec01bc4214d2bc179c