Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	chip-seq-alignment.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/ChIP-Seq/chip-seq-alignment.cwl Branch/Commit ID: 11f70a71cb68b3960c2d410ba1fdcd3b8a7e1419
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: ec5355f335852e51c6938809c16ea1d230a3f983
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_create_genomics-workspace_yml/flow_create_yml/workflow.cwl Branch/Commit ID: 7562bd2c6900b30bce6c6f78951cd76d28218f47
	WGS QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 7ebb8d2757914d16520b00571a281e2ad86a42cf
	tt_kmer_top_n.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 17bae57a1f00f5c6db8f3a82d86262f12b8153cf
	sequence (bam or fastqs) to trimmed fastqs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_trimmed_fastq.cwl Branch/Commit ID: 788bdc99c1d5b6ee7c431c3c011eb30d385c1370
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037
	workflow.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_apollo2_data_processing/processing/workflow.cwl Branch/Commit ID: 7562bd2c6900b30bce6c6f78951cd76d28218f47
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/bwa_mem.cwl Branch/Commit ID: 26ae4914651d5b3e188028d1e9d88a391b3f6730