Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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genomics-workspace-cds.cwl
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https://github.com/nal-i5k/organism_onboarding.git
Path: flow_genomicsWorkspace/genomics-workspace-cds.cwl Branch/Commit ID: aa375dcaa5ccfbb4e2aa4433d10948c641b044eb |
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bam_readcount workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 788bdc99c1d5b6ee7c431c3c011eb30d385c1370 |
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workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_dispatch/2working_files/workflow.cwl Branch/Commit ID: aa375dcaa5ccfbb4e2aa4433d10948c641b044eb |
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Get Proteins
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https://github.com/ncbi/pgap.git
Path: wf_bacterial_prot_src.cwl Branch/Commit ID: 2801ce53744a085580a8de91cd007c45146b51e8 |
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genomics-workspace-cds.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_genomicsWorkspace/genomics-workspace-cds.cwl Branch/Commit ID: aa375dcaa5ccfbb4e2aa4433d10948c641b044eb |
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Subworkflow to allow calling different SV callers which require bam files as inputs
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037 |
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align_merge_sas
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 7ebb8d2757914d16520b00571a281e2ad86a42cf |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 061d3a2fbcd8a1c39c0b38c549e528deb24a9d54 |
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tmb.cwl
Workflow for calculating TMB tumor mutational burden on a single sample |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/tmb.cwl Branch/Commit ID: 3bc4fab5503e58521ed0eb9c0d035ac18460dc13 |
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readme-assembly-workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_create_readme/readme-assembly-workflow.cwl Branch/Commit ID: aa375dcaa5ccfbb4e2aa4433d10948c641b044eb |
